The aim of Western blotting is to identify specific proteins within a complex mixture. The Western blot technique requires samples to be resolved on the basis of size through Sodium Dodecyl Sulfate Polyacrylamide Gel Electrophoresis (SDS PAGE), following which they are transferred to, and immobilized on, a membrane prior to antibody based detection.
Western Blot Indirect and Direct Labeling
Before running a Western blot it is extremely important to research the target protein thoroughly. To know more about this, refer to our Western blot guide.
- In a traditional Western blot (indirect labeling), protein samples are first resolved by SDS PAGE and then electrophoretically transferred to the membrane
- Subsequent to a blocking step, the membrane is probed with a primary antibody (poly- or monoclonal) that was raised against the antigen in question
- Following a washing step, the membrane is typically incubated with a dye or enzyme conjugated secondary antibody that is directed against the primary antibody
- The fluorescence of the dye or activity of the enzyme, such as Alkaline Phosphatase (AP), Glucose Oxidase (GO) or Horseradish Peroxidase (HRP) is necessary for signal generation
- Finally, the membrane is washed again and incubated with an appropriate enzyme substrate (if necessary), producing a reportable signal
- In direct labeling analysis, the need for the secondary antibody step is eliminated thereby simplifying the procedure, shortening the protocol and expediting the time to results.
Please watch our on demand Western blot Webinar for more information on the use of directly labeled antibodies for Western blotting.
Lightning-Link® – the world’s easiest antibody labeling technology for direct detection
Our Lightning-Link® antibody and protein labeling kits allow researchers to directly label their antibody, eliminating the need for a secondary antibody. The kits require only 30 seconds of hands on time, saving valuable time in the lab. Furthermore, there are no separation steps involved post conjugation, so you will retain 100% of your antibody! Discover our full range of Lightning-Link® Antibody Labelling kits which include our enzyme labeling kits for Horseradish Peroxidase and Alkaline Phosphatase and our fluorescent dyes.
Our RunBlue FAST Blotting Buffer increases the transfer speed of Western blots without excessive heat generation that affects proteins.
- Reduces blotting time by up to 60%
- Smaller protein transfer in less than 10 minutes and larger protein in only 15 minutes.
Check our range of Western blotting products from Expedeon that can assist you further.
There are several different choices of readout when Western blotting. Each with advantages and disadvantages – depending upon what your needs are and what equipment is available in your lab.
- Colorimetric blotting
- Fluorometric blotting
- Chemiluminescent blotting.
Colorimetric Western Blotting
Colorimetric detection relies on the generation of a colored product that becomes deposited on the Western blot, which is formed following the conversion of a chromogenic blotting substrate by an appropriate enzyme. The limited sensitivity of chromogenic substrates can make it difficult to optimize them for detecting proteins of low abundance, although the chromogenic reaction can be allowed to develop for several hours (or even overnight) to allow the background signal to develop simultaneously.
However, colorimetric substrates are perfect for the detection of abundant proteins since the reaction can be monitored visually and allowed to progress until there is adequate color development before being stopped. No specialized equipment is required for visualization of the colored precipitate, and the signal that is produced is highly stable. For more information download our Western blot Guide.
Fluorometric Western Blotting
Fluorometric detection requires the use of an antibody which has been labeled with a fluorophore. A light source is used to excite the fluorophore, which then produces a transient light emission as it returns to its ground state. The light is emitted at a higher wavelength than that which was used for excitation and is detected with a specialized reader.
Chemiluminescent Western blotting
Chemiluminescence occurs when a substrate is catalyzed by an enzyme and produces light as a byproduct of the reaction. The limiting reagent in the reaction is the substrate – as this is exhausted the light production decreases and eventually stops, however, a well optimized procedure should produce a stable light output for several hours allowing consistent and sensitive protein detection.
For more information:
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